Annual report 2015

Accessions considered in the study. Overview of the material considered in this study. For all materials, the GenBank identifier, the accession and species name as used in this study (Species) as well as their species synonyms used in the donor seed banks or in the NCBI GenBank (Material source/Reference) are provided. The genome symbol, and the country of origin, where the material was originally collected are given. The ploidy level measured in the scope of this study and the information if a herbarium voucher could be deposited in the herbarium of IPK Gatersleben (GAT) is given. Genomic formulas of tetraploids and hexploids are given as “female x male parent”. The genomes of Aegilops taxa follow Kilian et al. [74] and Li et al. [84]. Genome denominations for Hordeum follow Blattner [107] and Bernhardt [12] for the remaining taxa. (XLS 84 kb

matK all individuals Tree

Tree locus matK (raw tree for Fig. S14

Table S1 Individuals included in the study and number of reads per locus

Table S1 Individuals included in the study and number of reads per locu

matK all individuals Matrix

Matrix locus matK (data for Fig. S14

BCA output from BUCKy

Concordance file obtained from BUCKy on 12 loci (raw data Fig. S15

Hordeum diploids Supermatrix

12 loci concatenated matrix, only diploids (data Fig. 1

Supplementary Information

Supplementary Information containing annotated trees (Figs. S2-S17, S19), figures S1 and S18, tables S1 and S2 and references

*BEAST species tree

*BEAST output (TreeAnnotator) from three identical analyses combined with LogCombiner (raw tree Fig. 2

26 loci supermatrix Tree

Tree inferred from all loci from this study and Petersen et al. 2011 with one individual per diploid species (raw tree Fig. S17

26 loci supermatrix

Matrix including all loci from this study and Petersen et al. 2011 for one individual per diploid species (data for Fig. S17